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RAB3GAP2 gene

RAB3 GTPase activating non-catalytic protein subunit 2

Normal Function

The RAB3GAP2 gene provides instructions for making a protein that helps regulate the activity of specialized proteins called GTPases, which control a variety of functions in cells. To perform its function, the RAB3GAP2 protein interacts with another protein called RAB3GAP1 (produced from the RAB3GAP1 gene) to form the RAB3GAP complex.

Often referred to as molecular switches, GTPases can be turned on and off. They are turned on (active) when they are attached (bound) to a molecule called GTP and are turned off (inactive) when they are bound to another molecule called GDP. The RAB3GAP complex turns on a GTPase known as RAB18 by exchanging GTP for the attached GDP. When active, RAB18 is involved in a process called vesicle trafficking, which moves proteins and other molecules within cells in sac-like structures called vesicles. RAB18 regulates the movement of substances between compartments in cells and the storage and release of fats (lipids) by structures called lipid droplets. The protein also appears to play a role in a process called autophagy, which helps clear unneeded materials from cells. RAB18 is important for the organization of a cell structure called the endoplasmic reticulum, which is involved in protein processing and transport.

The RAB3GAP complex is also thought to inactivate another GTPase known as RAB3 by stimulating a reaction that turns the attached GTP into GDP. RAB3 plays a role in the release of hormones and brain chemicals (neurotransmitters) from cells.

Health Conditions Related to Genetic Changes

RAB18 deficiency

At least 10 RAB3GAP2 gene mutations have been found to cause RAB18 deficiency, resulting in conditions that affect the eyes, brain, and reproductive system. The two conditions caused by this deficiency are Warburg micro syndrome at the severe end of the spectrum and Martsolf syndrome at the mild end. RAB3GAP2 gene mutations are the most common cause of Martsolf syndrome and can also cause Warburg micro syndrome.

Martsolf syndrome is caused by RAB3GAP2 gene mutations that reduce the amount of functional RAB3GAP2 protein. Warburg micro syndrome occurs when the gene mutations prevent the production of any RAB3GAP2 protein or completely eliminate its function. Reduction or loss of this protein likely impairs the formation or function of the RAB3GAP complex, leading to a shortage (deficiency) of RAB18 activity. It is unclear why the loss of RAB18 function leads to eye problems, brain abnormalities, and other features of these two conditions.

Because Warburg micro syndrome and Martsolf syndrome can be caused by mutations in other genes that disrupt normal RAB18 activity, loss of control of this GTPase is thought to underlie the conditions. It is unclear if impaired regulation of RAB3 activity contributes to the features of Warburg micro syndrome or Martsolf syndrome.

More About This Health Condition


MedlinePlus Genetics provides information about Coloboma

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Other Names for This Gene

  • DKFZP434D245
  • KIAA0839
  • p150
  • RAB3 GTPase activating protein subunit 2 (non-catalytic)
  • rab3 GTPase-activating protein 150 kDa subunit
  • rab3 GTPase-activating protein non-catalytic subunit
  • rab3-GAP p150
  • rab3-GAP regulatory subunit
  • RAB3-GAP150
  • RAB3GAP150
  • RGAP-iso
  • SPG69
  • WARBM2

Additional Information & Resources

Tests Listed in the Genetic Testing Registry

Scientific Articles on PubMed

Catalog of Genes and Diseases from OMIM

Gene and Variant Databases


  • Aligianis IA, Morgan NV, Mione M, Johnson CA, Rosser E, Hennekam RC, Adams G, Trembath RC, Pilz DT, Stoodley N, Moore AT, Wilson S, Maher ER. Mutation in Rab3 GTPase-activating protein (RAB3GAP) noncatalytic subunit in a kindred with Martsolf syndrome. Am J Hum Genet. 2006 Apr;78(4):702-7. doi: 10.1086/502681. Epub 2006 Feb 14. Citation on PubMed or Free article on PubMed Central
  • Borck G, Wunram H, Steiert A, Volk AE, Korber F, Roters S, Herkenrath P, Wollnik B, Morris-Rosendahl DJ, Kubisch C. A homozygous RAB3GAP2 mutation causes Warburg Micro syndrome. Hum Genet. 2011 Jan;129(1):45-50. doi: 10.1007/s00439-010-0896-2. Epub 2010 Oct 22. Citation on PubMed
  • Feldmann A, Bekbulat F, Huesmann H, Ulbrich S, Tatzelt J, Behl C, Kern A. The RAB GTPase RAB18 modulates macroautophagy and proteostasis. Biochem Biophys Res Commun. 2017 May 6;486(3):738-743. doi: 10.1016/j.bbrc.2017.03.112. Epub 2017 Mar 22. Citation on PubMed
  • Gerondopoulos A, Bastos RN, Yoshimura S, Anderson R, Carpanini S, Aligianis I, Handley MT, Barr FA. Rab18 and a Rab18 GEF complex are required for normal ER structure. J Cell Biol. 2014 Jun 9;205(5):707-20. doi: 10.1083/jcb.201403026. Epub 2014 Jun 2. Citation on PubMed or Free article on PubMed Central
  • Handley MT, Carpanini SM, Mali GR, Sidjanin DJ, Aligianis IA, Jackson IJ, FitzPatrick DR. Warburg Micro syndrome is caused by RAB18 deficiency or dysregulation. Open Biol. 2015 Jun;5(6):150047. doi: 10.1098/rsob.150047. Citation on PubMed or Free article on PubMed Central
  • Sakane A, Manabe S, Ishizaki H, Tanaka-Okamoto M, Kiyokage E, Toida K, Yoshida T, Miyoshi J, Kamiya H, Takai Y, Sasaki T. Rab3 GTPase-activating protein regulates synaptic transmission and plasticity through the inactivation of Rab3. Proc Natl Acad Sci U S A. 2006 Jun 27;103(26):10029-34. doi: 10.1073/pnas.0600304103. Epub 2006 Jun 16. Citation on PubMed or Free article on PubMed Central

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